ProfileScan output for unknown protein

[ISREC-Server] Date: Fri Feb 4 0:05:13 MET 2000

searching prosite
searching pfamA (tempus fugit velut umbra)
searching gribskov
searching pattern

Sequence: unknown protein was searched against prosite pfamA gribskov pattern -library,
the sensitivity was set to significant_matches_only

In addition to the raw score, the normalized NScore is reported. Note that if you searched the Pfam bitscaled database, the normalized score shown is identical to the original HMMER bitscore.

Hits coming from PROSITE Profiles are color-coded in red
Hits coming from PROSITE Patterns in magenta
Hits coming from Pfam in blue
Hits coming from Gribskov collection in green

Significant matches are labeled with a red "!" in the first column.
If no match is found, the list below remains empty

 normalized raw        from -   to  Profile | Description

! 26.355 195649 pos.     59 -   239 PF00753 | LACTAMASE_B  Metallo-beta-lactamase superfamily [documentation]
!  1.0000     1 pos.    187 -   197 PS00013 | PROKAR LIPOPROTEIN  Prokaryotic membrane lipoprotein lipid attachment site [documentation]
!  1.0000     1 pos.    112 -   131 PS00743 | BETA LACTAMASE B 1  Beta-lactamases class B signature 1 [documentation]
!  1.0000     1 pos.    188 -   200 PS00744 | BETA LACTAMASE B 2  Beta-lactamases class B signature 2 [documentation]

Back to ISREC bioinformatics group home page